منابع مشابه
Executing SADI services in Galaxy
BACKGROUND In recent years Galaxy has become a popular workflow management system in bioinformatics, due to its ease of installation, use and extension. The availability of Semantic Web-oriented tools in Galaxy, however, is limited. This is also the case for Semantic Web Services such as those provided by the SADI project, i.e. services that consume and produce RDF. Here we present SADI-Galaxy,...
متن کاملMerging OpenLifeData with SADI services using Galaxy and Docker
Semantic Web technologies have been widely applied in Life Sciences, for example by data providers like OpenLifeData and Web Services frameworks like SADI. The recent OpenLifeData2SADI project offers access to the OpenLifeData data store through SADI services. This paper shows how to merge data from OpenLifeData with other extant SADI services in the Galaxy bioinformatics analysis platform, mak...
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It is often the case that new technologies revolutionize areas of intellectual endeavor. They can lead to new analytic rigor, challenge old habits of thought, and raise new theoretical questions. Historically, the most significant technological invention for the study of language was probably alphabetic transcription systems. However, the invention of portable sound-recorders also facilitated i...
متن کاملAutomatically exposing OpenLifeData via SADI semantic Web Services
BACKGROUND Two distinct trends are emerging with respect to how data is shared, collected, and analyzed within the bioinformatics community. First, Linked Data, exposed as SPARQL endpoints, promises to make data easier to collect and integrate by moving towards the harmonization of data syntax, descriptive vocabularies, and identifiers, as well as providing a standardized mechanism for data acc...
متن کاملSADI for GMOD: Semantic Web Services for Model Organism Databases
Here we describe work-in-progress on the SADI for GMOD project (SADI: Semantic Automated Discovery and Integration; GMOD: Generic Model Organism Database), a distribution of ready-made Web services that will bring additional model organism data onto the Semantic Web. SADI is a lightweight standard for implementing Web services that natively consume and generate RDF, while GMOD is a widely-used ...
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ژورنال
عنوان ژورنال: Nature
سال: 1890
ISSN: 0028-0836,1476-4687
DOI: 10.1038/042365a0